这是一个使用您的数据的图形示例,请注意方程式。此示例使用从数据散点图中手动估计的初始参数估计值,默认的 curve_fit 估计值默认均为 1.0,在这种情况下效果不佳。
import numpy as np
import scipy, matplotlib
import matplotlib.pyplot as plt
from scipy.optimize import curve_fit
xData = np.array([1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0, 14.0, 15.0, 16.0, 17.0, 18.0, 19.0, 20.0, 21.0, 22.0, 23.0, 24.0, 25.0, 26.0, 27.0, 28.0, 29.0, 30.0, 31.0])
yData = np.array([.99, 1.0, 0.98, 0.93, 0.85, 0.77, 0.67, 0.56, 0.46, 0.36, 0.27, 0.19, 0.12, 0.07, 0.03, 0.01, 0, 0.01, 0.05, 0.09, 0.16, 0.24, 0.33, 0.44, 0.55, 0.65, 0.76, 0.85, 0.93, 0.98, 1.0])
def fitFunc(x, amplitude, center, width, offset):
return amplitude * np.sin(np.pi * (x - center) / width) + offset
# these are the curve_fit default parameter estimates, and
# do not work well for this data and equation - manually estimate below
#initialParameters = np.array([1.0, 1.0, 1.0, 1.0])
# eyeball the scatterplot for some better, simple, initial parameter estimates
initialParameters = np.array([0.5, 1.0, 16.0, 0.5])
# curve fit the test data using initial parameters
fittedParameters, pcov = curve_fit(fitFunc, xData, yData, initialParameters)
print(fittedParameters)
modelPredictions = fitFunc(xData, *fittedParameters)
absError = modelPredictions - yData
SE = np.square(absError) # squared errors
MSE = np.mean(SE) # mean squared errors
RMSE = np.sqrt(MSE) # Root Mean Squared Error, RMSE
Rsquared = 1.0 - (np.var(absError) / np.var(yData))
print('RMSE:', RMSE)
print('R-squared:', Rsquared)
print()
##########################################################
# graphics output section
def ModelAndScatterPlot(graphWidth, graphHeight):
f = plt.figure(figsize=(graphWidth/100.0, graphHeight/100.0), dpi=100)
axes = f.add_subplot(111)
# first the raw data as a scatter plot
axes.plot(xData, yData, 'D')
# create data for the fitted equation plot
xModel = np.linspace(min(xData), max(xData))
yModel = fitFunc(xModel, *fittedParameters)
# now the model as a line plot
axes.plot(xModel, yModel)
axes.set_xlabel('X Data') # X axis data label
axes.set_ylabel('Y Data') # Y axis data label
plt.show()
plt.close('all') # clean up after using pyplot
graphWidth = 800
graphHeight = 600
ModelAndScatterPlot(graphWidth, graphHeight)