【问题标题】:Visualization of a decision tree inside a pipeline管道内决策树的可视化
【发布时间】:2019-12-18 21:52:30
【问题描述】:

我想用export_graphviz 可视化我的决策树,但是我不断收到以下错误:


  File "C:\Users\User\AppData\Local\Continuum\anaconda3\envs\data_science\lib\site-packages\sklearn\utils\validation.py", line 951, in check_is_fitted
    raise NotFittedError(msg % {'name': type(estimator).__name__})

NotFittedError: This Pipeline instance is not fitted yet. Call 'fit' with appropriate arguments before using this method.

我很确定我的管道已安装,因为我在代码中调用了 predict ,它工作得很好。这是有问题的代码:

from sklearn.tree import DecisionTreeRegressor
import pandas as pd
import numpy as np
from sklearn.pipeline import Pipeline
from sklearn.model_selection import train_test_split
from sklearn.tree import export_graphviz

#Parameters for model building an reproducibility
state = 13

data_age.dropna(inplace=True)
X_age = data_age.iloc[:,0:77]
y_age =  data_age.iloc[:,77]

X = X_age
y = y_age

#split between testing and training set
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2, random_state= state)

# Pipeline with the regressor
regressors = [DecisionTreeRegressor(random_state = state)]
for reg in regressors:
    steps=[('regressor', reg)]
    pipeline = Pipeline(steps) #seed that controls the random grid search

#Train the model

pipeline.set_params(regressor__max_depth = 5, regressor__min_samples_split =5, regressor__min_samples_leaf = 5).fit(X_train, y_train)
pred = pipeline.predict(X_test)
pipeline.score(X_test, y_test)

export_graphviz(pipeline, out_file='tree.dot')

我知道我在这里并不真正需要管道,但我仍然想了解问题是什么以供将来参考,并能够在已安装的管道内绘制决策树。

【问题讨论】:

    标签: python-3.x scikit-learn pipeline graphviz decision-tree


    【解决方案1】:

    export_graphviz 的签名是export_graphviz(decision_tree, ...),可以在documentation 中看到。

    因此,您应该将决策树作为参数传递给 export_graphviz 函数,而不是您的管道。

    您还可以在source code 中看到export_grpahviz 正在调用check_is_fitted(decision_tree, 'tree_') 方法。

    【讨论】:

      【解决方案2】:

      因此,根据 Farseer 的回答,最后一行必须是:

      
      #Train the model
      pipeline.set_params(regressor__max_depth = 5, regressor__min_samples_split =5, regressor__min_samples_leaf = 5).fit(X_train, y_train)
      pred = pipeline.predict(X_test)
      pipeline.score(X_test, y_test)
      
      #export as a .dot file
      export_graphviz(regressors[0], out_file='tree.dot')
      

      现在它可以工作了。

      【讨论】:

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