【问题标题】:A weird bug encountered with scipy, any thought?scipy 遇到的一个奇怪的错误,有什么想法吗?
【发布时间】:2019-07-05 03:22:03
【问题描述】:

我正在做一个优化项目,我遇到了一个非常奇怪的 scipy 错误。在多次执行目标函数后,它的参数向量神奇地变成了一个二维数组(但它应该一直是一个一维数组),没有任何明确的指令。 有人遇到过同样的事情吗? 这可能是一个 scipy 错误还是我应该再次仔细检查我的代码?

我的意思是,如果我的代码有问题,我看不出有什么原因会在正确执行几次迭代后发生

每次调用目标函数时,我都会打印 x 及其形状。这是目标函数内部的代码

def objective(x, some, other, parameters..):

    print("current x",x)
    print("current x.shape",x.shape)

    some code here...


    score = calculate_objective_function(some_parameters_here...)
    return -score

这就是发生的事情

current x [-2322.83367669 13868.03814803     0.        ]
current x.shape (3,)
0
current x [-2322.83367669 13868.03814803     0.        ]
current x.shape (3,)
1
current x [-2321.83367669 13868.03814803     0.        ]
current x.shape (3,)
2
current x [-2324.45171069 13868.03814803     0.        ]
current x.shape (3,)
3
current x [-2322.83367669 13868.03814803     0.        ]
current x.shape (3,)
4
current x [-2323.45171067 13868.03814803     0.        ]
current x.shape (3,)
5
current x [-2322.45171069 13868.03814803     0.        ]
current x.shape (3,)
6
current x [[-2322.8237272  13868.03814803     0.        ]]
current x.shape (1, 3)
Traceback (most recent call last):
  File "/home/mingzhe/PycharmProjects/ZebraFinder/venv/optimization_image.py", line 692, in <module>
    solution = minimize(objective,x0,method='Powell',args= additional_and_point_cloud, callback= callback_fun)
  File "/home/mingzhe/PycharmProjects/ZebraFinder/venv/lib/python3.5/site-packages/scipy/optimize/_minimize.py", line 590, in minimize
    return _minimize_powell(fun, x0, args, callback, **options)
  File "/home/mingzhe/PycharmProjects/ZebraFinder/venv/lib/python3.5/site-packages/scipy/optimize/optimize.py", line 2612, in _minimize_powell
    tol=xtol * 100)
  File "/home/mingzhe/PycharmProjects/ZebraFinder/venv/lib/python3.5/site-packages/scipy/optimize/optimize.py", line 2398, in _linesearch_powell
    alpha_min, fret, iter, num = brent(myfunc, full_output=1, tol=tol)
  File "/home/mingzhe/PycharmProjects/ZebraFinder/venv/lib/python3.5/site-packages/scipy/optimize/optimize.py", line 2109, in brent
    res = _minimize_scalar_brent(func, brack, args, **options)
  File "/home/mingzhe/PycharmProjects/ZebraFinder/venv/lib/python3.5/site-packages/scipy/optimize/optimize.py", line 2141, in _minimize_scalar_brent
    brent.optimize()
  File "/home/mingzhe/PycharmProjects/ZebraFinder/venv/lib/python3.5/site-packages/scipy/optimize/optimize.py", line 1992, in optimize
    fu = func(*((u,) + self.args))      # calculate new output value
  File "/home/mingzhe/PycharmProjects/ZebraFinder/venv/lib/python3.5/site-packages/scipy/optimize/optimize.py", line 2397, in myfunc
    return func(p + alpha*xi)
  File "/home/mingzhe/PycharmProjects/ZebraFinder/venv/lib/python3.5/site-packages/scipy/optimize/optimize.py", line 326, in function_wrapper
    return function(*(wrapper_args + args))
  File "/home/mingzhe/PycharmProjects/ZebraFinder/venv/optimization_image.py", line 550, in objective
    centroid = image_coordinate_from_world_coordinate(np.array([x[0],x[1]]),scale_factor,min_point_world)
IndexError: index 1 is out of bounds for axis 0 with size 1

Process finished with exit code 1

the screenshot of the bug

更新:@HYRY 的回答解决了问题。我的分数计算函数返回一个 1*1 numpy 矩阵而不是一个缩放器。转换为浮动后,它按预期工作。

【问题讨论】:

  • 你能添加错误和生成它的代码吗?
  • 是的@ladygremlin,我添加了信息
  • 题名不正确,能改个更合适的吗?
  • 嗨@iRohitBhatia,我知道标题可能不够准确,但情况很奇怪,老实说我不知道​​如何正确描述它。英语不是我的第一语言。很抱歉造成混乱,如果您有任何建议,那就太好了

标签: python numpy scipy


【解决方案1】:

可能返回的分数值不是标量值,例如:

import numpy as np
from scipy import optimize

cnt = 0
def f(x):
    global cnt
    print(x.shape)
    cnt += 1
    if cnt < 10:
        return np.sum(x**2)
    else:
        e = np.full((1, 1), fill_value=np.sum(x**2))
        return e

optimize.minimize(f, [0, 0, 1], method="powell")

【讨论】:

  • 哇,谢谢!分数是通过 numpy 数组乘法计算的,因此它返回一个二维数组 [[score]] 作为结果。转换为浮动后,代码确实按预期工作。但是您介意详细说明一下背后的原因吗?
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