使用 Gremlin 将 Tinkergraph 子图导出到文件

Question

使用 JanusGraph 和 Gremlin，我有一个似乎失败的图形导出要求。从 Gremlin 控制台，我可以导出我的小图： g.io('sample.json').write().iterate() 成功。 g 是 ==>graphtraversalsource[standardjanusgraph[berkeleyje:/var/lib/janusgraph/data], standard]

现在我想对子图做同样的事情，所以从 gremlin 控制台，我正在生成一个 tingergraph，如下所示：

gremlin> sn_graph = g.V().hasLabel('rule').repeat(bothE().subgraph('sample').otherV()).times(3).cap('sample').next()
==>tinkergraph[vertices:285 edges:276]
gremlin> sg = sn_graph.traversal()
==>graphtraversalsource[tinkergraph[vertices:285 edges:276], standard]
gremlin> sg.io('/tmp/sample.json').write().iterate()
org.apache.tinkerpop.gremlin.jsr223.console.RemoteException

我希望能够将我的子图导出到文件中，就像我能够导出我的原始图 g 一样。但我一直跑到一个例外。我觉得唯一的区别是一个是基于berkeleyje，另一个是tinkergraph。

java.lang.IllegalStateException
    at com.google.common.base.Preconditions.checkState(Preconditions.java:158)
    at org.janusgraph.graphdb.relations.RelationIdentifier.getInVertexId(RelationIdentifier.java:83)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.apache.tinkerpop.shaded.jackson.databind.ser.BeanPropertyWriter.serializeAsField(BeanPropertyWriter.java:688)
    at org.apache.tinkerpop.shaded.jackson.databind.ser.std.BeanSerializerBase.serializeFields(BeanSerializerBase.java:719)
    at org.apache.tinkerpop.shaded.jackson.databind.ser.std.BeanSerializerBase.serializeWithType(BeanSerializerBase.java:604)
    at org.apache.tinkerpop.gremlin.structure.io.graphson.GraphSONUtil.writeWithType(GraphSONUtil.java:51)
    at org.apache.tinkerpop.gremlin.structure.util.star.StarGraphGraphSONSerializerV2d0.ser(StarGraphGraphSONSerializerV2d0.java:89)
    at org.apache.tinkerpop.gremlin.structure.util.star.StarGraphGraphSONSerializerV2d0.serializeWithType(StarGraphGraphSONSerializerV2d0.java:65)
    at org.apache.tinkerpop.gremlin.structure.util.star.StarGraphGraphSONSerializerV2d0.serializeWithType(StarGraphGraphSONSerializerV2d0.java:48)
    at org.apache.tinkerpop.shaded.jackson.databind.ser.impl.TypeWrappedSerializer.serialize(TypeWrappedSerializer.java:32)
    at org.apache.tinkerpop.shaded.jackson.databind.ser.DefaultSerializerProvider._serialize(DefaultSerializerProvider.java:480)
    at org.apache.tinkerpop.shaded.jackson.databind.ser.DefaultSerializerProvider.serializeValue(DefaultSerializerProvider.java:319)
    at org.apache.tinkerpop.shaded.jackson.databind.ObjectMapper._configAndWriteValue(ObjectMapper.java:3905)
    at org.apache.tinkerpop.shaded.jackson.databind.ObjectMapper.writeValue(ObjectMapper.java:3176)
    at org.apache.tinkerpop.gremlin.structure.io.graphson.GraphSONWriter.writeVertex(GraphSONWriter.java:82)
    at org.apache.tinkerpop.gremlin.structure.io.graphson.GraphSONWriter.writeVertices(GraphSONWriter.java:110)
    at org.apache.tinkerpop.gremlin.structure.io.graphson.GraphSONWriter.writeGraph(GraphSONWriter.java:71)
    at org.apache.tinkerpop.gremlin.process.traversal.step.sideEffect.IoStep.write(IoStep.java:121)
    at org.apache.tinkerpop.gremlin.process.traversal.step.sideEffect.IoStep.processNextStart(IoStep.java:112)
    at org.apache.tinkerpop.gremlin.process.traversal.step.util.AbstractStep.hasNext(AbstractStep.java:143)
    at org.apache.tinkerpop.gremlin.process.traversal.step.util.ExpandableStepIterator.next(ExpandableStepIterator.java:50)
    at org.apache.tinkerpop.gremlin.process.traversal.step.filter.FilterStep.processNextStart(FilterStep.java:37)
    at org.apache.tinkerpop.gremlin.process.traversal.step.util.AbstractStep.next(AbstractStep.java:128)
    at org.apache.tinkerpop.gremlin.process.traversal.step.util.AbstractStep.next(AbstractStep.java:38)
    at org.apache.tinkerpop.gremlin.process.traversal.Traversal.iterate(Traversal.java:203)
    at org.apache.tinkerpop.gremlin.process.traversal.dsl.graph.GraphTraversal.iterate(GraphTraversal.java:2862)
    at org.apache.tinkerpop.gremlin.process.traversal.dsl.graph.GraphTraversal$Admin.iterate(GraphTraversal.java:187)
    at org.apache.tinkerpop.gremlin.process.traversal.dsl.graph.DefaultGraphTraversal.iterate(DefaultGraphTraversal.java:48)
    at org.apache.tinkerpop.gremlin.process.traversal.dsl.graph.GraphTraversal$Admin$iterate.call(Unknown Source)
    at org.codehaus.groovy.runtime.callsite.CallSiteArray.defaultCall(CallSiteArray.java:47)
    at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:115)
    at org.codehaus.groovy.runtime.callsite.AbstractCallSite.call(AbstractCallSite.java:119)
    at Script205.run(Script205.groovy:1)
    at org.apache.tinkerpop.gremlin.groovy.jsr223.GremlinGroovyScriptEngine.eval(GremlinGroovyScriptEngine.java:674)
    at org.apache.tinkerpop.gremlin.groovy.jsr223.GremlinGroovyScriptEngine.eval(GremlinGroovyScriptEngine.java:376)
    at javax.script.AbstractScriptEngine.eval(AbstractScriptEngine.java:233)
    at org.apache.tinkerpop.gremlin.groovy.engine.GremlinExecutor.lambda$eval$0(GremlinExecutor.java:266)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    at java.lang.Thread.run(Thread.java:748)

我似乎无法弄清楚我在这里缺少什么。任何帮助表示赞赏！

Answer 1

您的 TinkerGraph 包含 JanusGraph 标识符 - RelationIdentifier - 而 GraphSON 不知道如何序列化它。您需要按照here 的讨论提供 JanusGraph GraphSON 序列化程序：

file = new FileOutputStream("/tmp/sample.json")
mapper = GraphSONMapper.build().addCustomModule(org.janusgraph.graphdb.tinkerpop.io.graphson.JanusGraphSONModuleV2d0.getInstance()).create()
writer = GraphSONWriter.build().mapper(mapper).create()
writer.writeGraph(file, sg) 

上述方法直接使用GraphSONWriter，但您也可以将其交给io()步骤，因为您是通过Gremlin Console发送脚本：

sg.io('/tmp/sample.json').
     with(IO.registry, JanusGraphIoRegistry.getInstance()).
   write().iterate()