【发布时间】:2019-11-20 00:16:56
【问题描述】:
我已经定义了一个对数似然函数,并且我有一个变量在均匀分布上进行采样。我确保对数似然函数为相同的输入返回相同的结果。但是当我采样时,每次分布都有些不同(在相同的范围内)。
发生了什么事?
import pymc3 as mc
import theano.tensor as tt
SAMPLES = 1000
TUNING_SAMPLES = 100
N_CORES = 10
N_CHAINS = 2
#(logl_ThetaFromChoices is defined above with the input)
# use PyMC3 to sampler from log-likelihood
with mc.Model() as modelFindTheta:
theta = mc.Uniform('theta', lower=-200.0, upper=200.0)
# convert m and c to a tensor vector
theta = tt.as_tensor_variable(theta)
def callOp(v):
return logl_ThetaFromChoices(v)
mc.DensityDist('logl_ThetaFromChoices', callOp, observed={'v': theta})
step1 = mc.Metropolis()
trace_theta = mc.sample(SAMPLES,
tune=TUNING_SAMPLES,
discard_tuned_samples=True,
chains=N_CHAINS,
cores=N_CORES,
step=step1)
'alpha' == 这里的 Theta
【问题讨论】:
标签: python pymc3 markov-chains mcmc