【问题标题】:How to modify the legend of a plotting using ggproto function in ggplot2?如何在 ggplot2 中使用 ggproto 函数修改绘图的图例?
【发布时间】:2017-03-02 08:16:27
【问题描述】:

在主成分分析中,我提取prcomp() 中的成分结果作为散点图。我想添加组名的标签,然后使用MASS::cov.trob() 在每个组中计算每个组的中心。我使用ggplot2::ggproto() 创建新的统计数据并重建新的几何图形,以展示每个组的标签。但是,新图具有不合理的图例,因为它应该是点图例而不是字符图例。我已经尝试了多种变体,但它们似乎都不起作用。有任何想法吗?这是我的代码:

# data
data(Cars93, package = "MASS")
car_df <- Cars93[, c(3, 5, 13:15, 17, 19:25)]
car_df <- subset(car_df, Type == "Large" | Type == "Midsize" | Type == "Small")
x1 <- mean(car_df$Price) + 2 * sd(car_df$Price)
x2 <- mean(car_df$Price) - 2 * sd(car_df$Price)
car_df <- subset(car_df, Price > x2 | Price < x1)
car_df <- na.omit(car_df)

# Principal Component Analysis
car.pca <- prcomp(car_df[, -1], scale = T)
car.pca_pre <- cbind(as.data.frame(predict(car.pca)[, 1:2]), car_df[, 1])
colnames(car.pca_pre) <- c("PC1", "PC2", "Type")
head(car.pca_pre)

# create a new stat
library(ggplot2)
StatLabel <- ggproto("StatLabel" ,Stat,
               compute_group = function(data, scales) {
                library(MASS)
                df <- data.frame(data$x,data$y)
                center <- cov.trob(df)$center
                names(center)<- NULL 
                center <- t(as.data.frame(center))
                center <- as.data.frame(cbind(center))
                colnames(center) <- c("x","y")
                rownames(center) <- NULL
                return(center)
                },
                required_aes = c("x", "y")
)

stat_label <- function (mapping = NULL, data = NULL, stat = "identity", position = "identity", 
    ..., parse = FALSE, nudge_x = 0, nudge_y = 0, label.padding = unit(0.15, 
        "lines"), label.r = unit(0.15, "lines"), label.size = 0.1, 
    na.rm = FALSE, show.legend = NA, inherit.aes = TRUE) 
{
    if (!missing(nudge_x) || !missing(nudge_y)) {
        if (!missing(position)) {
            stop("Specify either `position` or `nudge_x`/`nudge_y`", 
                call. = FALSE)
        }
        position <- position_nudge(nudge_x, nudge_y)
    }
    layer(data = data, mapping = mapping, stat = StatLabel, geom = GeomLabel, 
        position = position, show.legend = show.legend, inherit.aes = inherit.aes, 
        params = list(parse = parse, label.padding = label.padding, 
            label.r = label.r, label.size = label.size, na.rm = na.rm, 
            ...))
}

# plot
ggplot(car.pca_pre, aes(PC1, PC2, color = Type)) + geom_point() + 
stat_label(aes(label = Type))

【问题讨论】:

    标签: r plot ggplot2 legend ggproto


    【解决方案1】:

    我认为让你的新数据在图例中显示点不是很自然,因为它不会绘制任何点。就目前而言,当点和文本都具有组合图例时,ggplot 似乎优先于文本图例。最简单的解决方案是默认情况下不为您的标签统计数据添加图例。

    您可以将函数更改为将show.legend = FALSE 作为默认值,然后您的绘图将显示点图例。

    stat_label <- function (mapping = NULL, 
                            data = NULL, 
                            stat = "identity", 
                            position = "identity", 
                            ..., 
                            parse = FALSE, 
                            nudge_x = 0, nudge_y = 0, 
                            label.padding = unit(0.15, "lines"), 
                            label.r = unit(0.15, "lines"), 
                            label.size = 0.1, 
                            na.rm = FALSE, 
                            show.legend = FALSE,       ## <--- change
                            inherit.aes = TRUE) 
    {
      if (!missing(nudge_x) || !missing(nudge_y)) {
        if (!missing(position)) {
          stop("Specify either `position` or `nudge_x`/`nudge_y`", 
               call. = FALSE)
        }
        position <- position_nudge(nudge_x, nudge_y)
      }
      layer(data = data, mapping = mapping, stat = StatLabel, geom = GeomLabel, 
            position = position, show.legend = show.legend, inherit.aes = inherit.aes, 
            params = list(parse = parse, label.padding = label.padding, 
                          label.r = label.r, label.size = label.size, na.rm = na.rm, 
                          ...))
    }
    
    # plot
    ggplot(car.pca_pre, aes(PC1, PC2, color = Type)) + geom_point() + 
      stat_label(aes(label = Type))
    

    【讨论】:

    • 谢谢!我完成了adegraphics::s.classlink中显示的新几何图形。
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