【发布时间】:2015-09-01 13:02:10
【问题描述】:
我尝试安装使用 Bioconductor (R): 3.1 (3.2.1) 构建的 this package。但是,我收到以下错误:
Bioconductor version 3.1 (BiocInstaller 1.18.4), ?biocLite for help
* DONE (BiocInstaller)
The downloaded source packages are in
\u2018/tmp/Rtmp6YGmfv/downloaded_packages\u2019
Bioconductor version 3.1 (BiocInstaller 1.18.4), ?biocLite for help
> workflowInstall("chipseqDB")
Installing package into \u2018/home/lorencm/R/x86_64-redhat-linux-gnu-library/3.2\u2019
(as \u2018lib\u2019 is unspecified)
Warning message:
package \u2018chipseqDB\u2019 is not available (for R version 3.2.1)
接下来,我使用以下命令更新 R 失败:
> install.packages("installr") # install
Installing package into \u2018/home/lorencm/R/x86_64-redhat-linux-gnu-library/3.2\u2019
(as \u2018lib\u2019 is unspecified)
--- Please select a CRAN mirror for use in this session ---
Warning message:
package \u2018installr\u2019 is not available (for R version 3.2.1)
>
如何找出包需要哪个 R 版本或 lib PATH 错误?
【问题讨论】:
-
通常它在“Depends R (>= version)”下声明如下:bioconductor.org/packages/release/bioc/html/cn.mops.html 奇怪的是,chipseqDB 似乎没有这样的页面(我收到一条错误消息)。最好你应该联系包的维护者。
-
我觉得你的代码中有几个“\u”很奇怪,你的编码有问题吗?
标签: r bioconductor