【发布时间】：2019-10-02 13:22:05
【问题描述】：
我正在尝试下载 WGCNA 包并收到以下错误。
我按照https://horvath.genetics.ucla.edu/html/CoexpressionNetwork/Rpackages/WGCNA/的指示进行操作
install.packages("WGCNA")
我特别收到以下“install.packages 中的警告：安装包‘WGCNA’的退出状态非零”。
> install.packages("WGCNA")
Package which is only available in source form, and may need compilation of C/C++/Fortran: ‘WGCNA’
Do you want to attempt to install these from sources? (Yes/no/cancel) Yes
installing the source package ‘WGCNA’
trying URL 'https://cran.rstudio.com/src/contrib/WGCNA_1.68.tar.gz'
Content type 'application/x-gzip' length 1166156 bytes (1.1 MB)
==================================================
downloaded 1.1 MB
* installing *source* package ‘WGCNA’ ...
** package ‘WGCNA’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
xcrun: error: invalid active developer path (/Library/Developer/CommandLineTools), missing xcrun at: /Library/Developer/CommandLineTools/usr/bin/xcrun
ERROR: compilation failed for package ‘WGCNA’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/WGCNA’
Warning in install.packages :
installation of package ‘WGCNA’ had non-zero exit status
The downloaded source packages are in
‘/private/var/folders/4_/d5qjrrgj25j2v73z3jwcyj600000gn/T/RtmpaRft6B/downloaded_packages’
【问题讨论】：
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你安装了 XCode 吗？
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不，我没有。需要吗？
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是的，因为您是从源代码安装的。见#4 of the FAQs on WGCNA。您可以找到说明：在Mac OS section here 上设置 XCode。
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刚刚安装完 Xcode。我仍然收到同样的信息。
标签： r