【发布时间】:2019-06-10 10:38:30
【问题描述】:
我有使用 CTest 编写的单元测试,这些测试依赖于英特尔的 MKL BLAS 实现。我使用find_package(BLAS) 并将测试可执行文件链接到${BLAS_LIBRARIES}。测试可执行文件依赖DYLD_LIBRARY_PATH 来查找mkl 库,而不是嵌入的LC_RPATH。
不幸的是,由于SIP,DYLD_LIBRARY_PATH 不会传播到ctest 环境,因此当它尝试运行测试时,它无法链接mkl 库。
有没有办法让CMake 为构建目录中的测试可执行文件嵌入外部LC_PATH?
这是一个基本的测试可执行文件 (test.cpp)
#include <mkl_cblas.h>
int main() {
return &cblas_dgemm != nullptr;
}
这里是关联的CMakeLists.txt
cmake_minimum_required(VERSION 3.14.5)
project(blas LANGUAGES CXX)
include(CTest)
set(BLA_VENDOR Intel10_64lp_seq)
find_package(BLAS REQUIRED)
add_executable(test_blas test.cpp)
target_link_libraries(test_blas ${BLAS_LIBRARIES})
add_test(NAME test_direct COMMAND test_blas)
我找到MKL 并构建没有任何问题。
Lukes-MacBook:test ldalessa$ cmake .
-- The CXX compiler identification is AppleClang 10.0.1.10010046
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for C++ include pthread.h
-- Looking for C++ include pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /opt/intel/compilers_and_libraries_2019.4.233/mac/mkl/lib/libmkl_intel_lp64.dylib;/opt/intel/compilers_and_libraries_2019.4.233/mac/mkl/lib/libmkl_sequential.dylib;/opt/intel/compilers_and_libraries_2019.4.233/mac/mkl/lib/libmkl_core.dylib;-lm;-ldl
-- Configuring done
-- Generating done
-- Build files have been written to: /Users/ldalessa/test
Lukes-MacBook:test ldalessa$ make VERBOSE=1
/usr/local/Cellar/cmake/3.14.5/bin/cmake -S/Users/ldalessa/test -B/Users/ldalessa/test --check-build-system CMakeFiles/Makefile.cmake 0
/usr/local/Cellar/cmake/3.14.5/bin/cmake -E cmake_progress_start /Users/ldalessa/test/CMakeFiles /Users/ldalessa/test/CMakeFiles/progress.marks
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f CMakeFiles/Makefile2 all
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f CMakeFiles/test_blas.dir/build.make CMakeFiles/test_blas.dir/depend
cd /Users/ldalessa/test && /usr/local/Cellar/cmake/3.14.5/bin/cmake -E cmake_depends "Unix Makefiles" /Users/ldalessa/test /Users/ldalessa/test /Users/ldalessa/test /Users/ldalessa/test /Users/ldalessa/test/CMakeFiles/test_blas.dir/DependInfo.cmake --color=
Dependee "/Users/ldalessa/test/CMakeFiles/test_blas.dir/DependInfo.cmake" is newer than depender "/Users/ldalessa/test/CMakeFiles/test_blas.dir/depend.internal".
Dependee "/Users/ldalessa/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/Users/ldalessa/test/CMakeFiles/test_blas.dir/depend.internal".
Scanning dependencies of target test_blas
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f CMakeFiles/test_blas.dir/build.make CMakeFiles/test_blas.dir/build
[ 50%] Building CXX object CMakeFiles/test_blas.dir/test.cpp.o
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -o CMakeFiles/test_blas.dir/test.cpp.o -c /Users/ldalessa/test/test.cpp
[100%] Linking CXX executable test_blas
/usr/local/Cellar/cmake/3.14.5/bin/cmake -E cmake_link_script CMakeFiles/test_blas.dir/link.txt --verbose=1
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -Wl,-search_paths_first -Wl,-headerpad_max_install_names CMakeFiles/test_blas.dir/test.cpp.o -o test_blas /opt/intel/compilers_and_libraries_2019.4.233/mac/mkl/lib/libmkl_intel_lp64.dylib /opt/intel/compilers_and_libraries_2019.4.233/mac/mkl/lib/libmkl_sequential.dylib /opt/intel/compilers_and_libraries_2019.4.233/mac/mkl/lib/libmkl_core.dylib -lm -ldl
[100%] Built target test_blas
/usr/local/Cellar/cmake/3.14.5/bin/cmake -E cmake_progress_start /Users/ldalessa/test/CMakeFiles 0
Lukes-MacBook:test ldalessa$ ./test_blas
Lukes-MacBook:test ldalessa$
但是当我使用CTest 运行时,我遇到了SIP 问题。
ukes-MacBook:test ldalessa$ make test
Running tests...
Test project /Users/ldalessa/test
Start 1: test_direct
1/1 Test #1: test_direct ......................Child aborted***Exception: 0.01 sec
0% tests passed, 1 tests failed out of 1
Total Test time (real) = 0.01 sec
The following tests FAILED:
1 - test_direct (Child aborted)
Errors while running CTest
make: *** [test] Error 8
Lukes-MacBook:test ldalessa$ cat Testing/Temporary/LastTest.log
Start testing: Jun 10 03:35 PDT
----------------------------------------------------------
1/1 Testing: test_direct
1/1 Test: test_direct
Command: "/Users/ldalessa/test/test_blas"
Directory: /Users/ldalessa/test
"test_direct" start time: Jun 10 03:35 PDT
Output:
----------------------------------------------------------
dyld: Library not loaded: @rpath/libmkl_intel_lp64.dylib
Referenced from: /Users/ldalessa/test/test_blas
Reason: image not found
<end of output>
Test time = 0.01 sec
----------------------------------------------------------
Test Failed.
"test_direct" end time: Jun 10 03:35 PDT
"test_direct" time elapsed: 00:00:00
----------------------------------------------------------
End testing: Jun 10 03:35 PDT
Lukes-MacBook:test ldalessa$
【问题讨论】:
-
我仍然需要并回答这个问题,但我目前的临时解决方法是使用 Apple 的 Accelerate 框架而不是 MKL,它可以正确链接。问题是这是侵入性的,因为英特尔的 MKL 使用不同的标头(
mkl_blas.h、mkl_lapack.h)和符号名称,所以我必须有一些额外的配置时间和配置的标头废话来适应代码库。
标签: macos cmake intel-mkl ctest