【发布时间】:2019-07-24 08:29:13
【问题描述】:
我正在尝试从我的主管那里调试此代码,而且我是 C++ 新手。
我发现了一些类似的 no matching function for call to 问题,这让我知道了问题可能是什么但无法解决。
我在错误信息和相关功能下方列出了我的想法。
错误信息:
In function ‘int main(int, char**)’:
distanceMatrixToSageGraph.c:104:43: error: no matching function for call to
‘std::vector<std::vector<int>>::push_back(std::vector<std::__cxx11::basic_string<char> >&)’
the_entries.push_back( row_as_vector );
相关功能:
int main(int argc, char** threshold_and_distanceMatrixfilename)
{
if (argc < 2 || argc > 2)
{
std::cerr << "Usage: ./distanceMatrixToSageGraph.o <threshold>
<distanceMatrix_file_calculated_fromDGEsingleCell_data>" << std::endl;
return -1;
}
string distanceMatrixfilename = threshold_and_distanceMatrixfilename[2];
int threshold = std::stoi(threshold_and_distanceMatrixfilename[1]);
std::ifstream distanceMatrixFile(distanceMatrixfilename);
if (!distanceMatrixFile)
{
std::cerr << "Error opening distanceMatrix file: " << distanceMatrixfilename << std::endl;
return -1;
}
string row;
std::getline(distanceMatrixFile, row); // discard the first row, which specifies the format of the file.
vector<vector<int>> the_entries;
while (std::getline(distanceMatrixFile, row))
{
std::stringstream row_as_stringstream(row);
int i; i = 0;
vector<string> row_as_vector;
while (row_as_stringstream.good())
{
string substr;
getline(row_as_stringstream, substr, ',');
row_as_vector.push_back(substr);
};
the_entries.push_back(row_as_vector); //LINE 104
};
}
想法:
- 如果有人能给我解释一下就好了:
std::vector<std::vector<int>>::push_back(std::vector<std::__cxx11::basic_string<char>>&) - 我知道
std::vector<std::vector<int>>是一个矩阵并且push_back在向量末尾添加一个元素。 - 我怀疑我们正在尝试读取错误的类型
the_entries.push-back(row_as_vector)。 -
原始代码以
csv文件作为输入,包含integers和strings。现在我们正在读取具有以下形状的txt文件:TEXT 0; INT; INT; INT; INT; ... 0; INT; INT; INT; INT; ... 18 more lines of the above numbers and semicolons在上面,我们删除了
89行中的第一行。 代码是否可能需要进行更多更改才能 阅读这个
txt文件而不是csv文件?
错误信息的其余部分:
In file included from /usr/include/c++/6/vector:64:0,
from distanceMatrixToSageGraph.c:13:
/usr/include/c++/6/bits/stl_vector.h:914:7: note: candidate: void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::vector<int>; _Alloc = std::allocator<std::vector<int> >; std::vector<_Tp, _Alloc>::value_type = std::vector<int>]
push_back(const value_type& __x)
^~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:914:7: note: no known conversion for argument 1 from ‘std::vector<std::__cxx11::basic_string<char> >’ to ‘const value_type& {aka const std::vector<int>&}’
/usr/include/c++/6/bits/stl_vector.h:932:7: note: candidate: void std::vector<_Tp, _Alloc>::push_back(std::vector<_Tp, _Alloc>::value_type&&) [with _Tp = std::vector<int>; _Alloc = std::allocator<std::vector<int> >; std::vector<_Tp, _Alloc>::value_type = std::vector<int>]
push_back(value_type&& __x)
^~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:932:7: note: no known conversion for argument 1 from ‘std::vector<std::__cxx11::basic_string<char> >’ to ‘std::vector<std::vector<int> >::value_type&& {aka std::vector<int>&&}’
完整代码:
// Convert distanceMatrix tables of protein interactions to SAGE graph.
///////////////////////////////////////////////////////////////////////////
#include <iostream>
#include <fstream>
#include <sstream>
#include <math.h>
#include <stdlib.h>
#include <string.h>
#include <stdio.h>
#include <list>
#include <vector>
#include <tuple>
#include <algorithm>
using namespace std;
void writeGraphInSageFormat(string name, std::vector<std::vector<int>> TheEdges)
{
//////////////////////////////////////////////////////////////////////////////////////
// Write out the edges in SAGE format.
///////////////////////////////////////////////////////////////////////////////////////
int edgeNumber = TheEdges.size();
ofstream d1sageFile(name, ios::out);
d1sageFile << "g = Graph([" << endl;
for (int n = 0; n < edgeNumber; n++) {
d1sageFile << "(" << TheEdges[n][0] + 1 << "," << TheEdges[n][1] + 1 << ")," << endl;
}
d1sageFile << "])" << endl;
d1sageFile << "g.show()" << endl;
d1sageFile.close();
std::cout << "SAGE graph written into the file " << name << std::endl;
}
std::vector<std::vector<int>> ConvertEntriesMatrixToEdges(vector<vector<int>> the_entries, int threshold)
{
////////////////////////////////////////////////////////////////////////////////////////////
// Construct the edge-vertex incidence matrix (d_1) from the distanceMatrix entries matrix:
////////////////////////////////////////////////////////////////////////////////////////////
std::vector<std::string> proteinNames;
std::vector<std::vector<int>> TheEdges;
std::cout << "Registering only edges shorter than " << threshold << "." << std::endl;
int thisDistance;
for (int i = 0; i < the_entries.size(); i++)
{
for (int j = i + 1; j < the_entries.size(); j++)
{
// we could use the_entries.size() instead of the_entries.at(i).size(), because this is a square matrix.
thisDistance = the_entries.at(i).at(j);
if (thisDistance < threshold)
{
std::vector<int> CurrentEdge(2);
CurrentEdge[0] = i;
CurrentEdge[1] = j;
TheEdges.push_back(CurrentEdge);
};
};
};
return TheEdges;
}
///////////////////////////////////////////
// Main Program: Extract edges from a distanceMatrix file.
///////////////////////////////////////////
int main(int argc, char** threshold_and_distanceMatrixfilename)
{
if (argc < 2 || argc > 2)
{
std::cerr << "Usage: ./distanceMatrixToSageGraph.o <threshold> <distanceMatrix_file_calculated_fromDGEsingleCell_data>" << std::endl;
return -1;
}
string distanceMatrixfilename = threshold_and_distanceMatrixfilename[2];
int threshold = std::stoi(threshold_and_distanceMatrixfilename[1]);
std::ifstream distanceMatrixFile(distanceMatrixfilename);
if (!distanceMatrixFile) {
std::cerr << "Error opening distanceMatrix file: " << distanceMatrixfilename << std::endl;
return -1;
}
string row; //LINE 88
std::getline(distanceMatrixFile, row); // discard the first row, which specifies the format of the file.
vector<vector<int>> the_entries;
while (std::getline(distanceMatrixFile, row))
{
std::stringstream row_as_stringstream(row);
int i; i = 0;
vector<string> row_as_vector;
while (row_as_stringstream.good())
{
string substr;
getline(row_as_stringstream, substr, ',');
row_as_vector.push_back(substr);
};
the_entries.push_back(row_as_vector); //LINE 104
};
////////////////////////////////////////////////////////////
// Now we assemble the entries to an edges matrix, and write it into a Sage file:
////////////////////////////////////////////////////////////
std::vector<std::vector<int>> TheEdges = ConvertEntriesMatrixToEdges(the_entries, threshold);
char outputFilename[60]; strcpy(outputFilename, distanceMatrixfilename.c_str()); strcat(outputFilename, "AtThreshold"); string thrshld = std::to_string(threshold); strcat(outputFilename, thrshld.c_str()); strcat(outputFilename, ".txt");
writeGraphInSageFormat(outputFilename, TheEdges);
return 0;
}
【问题讨论】:
-
the_entries是vector<vector<int>>,而您正在尝试push_backvector<string>。那是string的向量,而不是int。这和错误信息说的一模一样,也许它叫std::stringstd::__cxx11::basic_string<char>让你感到困惑。 -
您试图将
row_as_vector(字符串向量)放入the_entries,这是整数向量的向量。因此你的错误。 -
@Blaze 没错,我不知道
std::__cxx11::basic_string<char>只是std::string
标签: c++ c++11 data-structures stdvector function-call