【发布时间】:2021-06-15 03:59:58
【问题描述】:
此脚本会根据 csv 中的数据库查询包含物种名称的 csv,如果两者都存在则返回。问题是虽然它仍在阅读所有要搜索的术语,但它只搜索第一个。即如果我在“for row in p”之前打印物种,所有物种名称都会正确返回
from pathlib import Path
import os
import csv
p = csv.reader(open('Paldat.csv','r',newline=''), delimiter=',')
with open('newsssssss.csv','r',newline='\n')as r:
for line in r:
taxons=line.split(',')
no = ['\r\n']
noo = ['\n']
if taxons == no:
continue
elif taxons == noo:
continue
else:
speciesl = []
for val in taxons:
val = val.replace('\n','')
speciesl.append(val)
g=speciesl[0].lower()
if len(speciesl) < 2:
continue
else:
s=speciesl[1].lower()
for row in p: #This loop seems to be the issue
genus = row[0].lower()
species = row[1].lower()
if g == genus and s == species:
print('Perfect match')
print(g)
elif s == species:
print(speciesl)
print('Species found')
else:
continue
else:
continue
这是 Paldat.csv 的一部分:
Camassia,leichtlinii,monad,monad,large (51-100 µm),-,-,-,-,-,sulcate,heteropolar,oblate,-,elliptic,-,-,boat-shaped,no suitable term,aperture(s) sunken,1,sulcus,sulcate,aperture membrane ornamented,-,-,-,"reticulate, heterobrochate, perforate",-,-,-,-,-,-,-,-,-,-,-,present,,
Cistus,parviflorus,monad,monad,medium-sized (26-50 µm),-,-,-,-,-,colporate,isopolar,-,spheroidal,circular,-,-,spheroidal,circular,"aperture(s) sunken, not infolded",3,colporus,"colporate, tricolporate",-,-,-,-,striato-reticulate,-,-,-,-,-,-,-,-,-,-,-,absent,,
Camellia,japonica,monad,monad,medium-sized (26-50 µm),41-50 µm,36-40 µm,41-50 µm,41-50 µm,41-50 µm,colpate,isopolar,-,spheroidal,circular,oblique,prolate,-,triangular,aperture(s) sunken,3,colpus,"colpate, tricolpate",operculum,"granulate, scabrate, reticulate",-,-,microreticulate,-,-,-,-,-,-,-,-,-,-,-,-,,
Camellia,sinensis,monad,monad,medium-sized (26-50 µm),41-50 µm,36-40 µm,41-50 µm,41-50 µm,41-50 µm,colporate,isopolar,oblate,-,triangular,oblique,isodiametric,-,triangular,aperture(s) sunken,3,colporus,"colporate, tricolporate",operculum,"scabrate, verrucate, gemmate",-,-,"verrucate, perforate",-,-,-,-,-,-,-,-,-,-,-,-,,
以及 newsssssss.csv 的一部分:
Camassia,leichtlinii
Camellia,japonica
Camellia,sinensis
Chrysanthemum,leucanthemum
Cirsium,arvense
Cissus,quadrangularis
【问题讨论】:
-
请提供预期的minimal, reproducible example (MRE)。我们应该能够复制和粘贴您的代码的连续块,执行该文件,并重现您的问题以及跟踪问题点的输出。这让我们可以根据您的测试数据和所需的输出来测试我们的建议。显示中间结果与您的预期不同的地方。您发布的代码不是最少的;运行失败是因为私有文件,你没有追查到问题点。
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道歉。现在应该修复了
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当您第一次使用
for row in p循环遍历文件“Paldat.csv”的全部内容时,在r上运行循环。在r的以下循环中,您已经到达p的末尾,因此不会从该文件中读取更多行。 -
完美,谢谢!! - 我把
p=csv.reader(...paldat.csv...)放在for line in r里面,它起作用了